Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.96■□□□□ 0.15
GCM1Q9NP62 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.96■□□□□ 0.15
GCM1Q9NP62 FAM87A-204ENST00000613235 858 ntBASIC15.96■□□□□ 0.15
GCM1Q9NP62 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GCM1Q9NP62 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.96■□□□□ 0.14
GCM1Q9NP62 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 AC008622.2-201ENST00000617006 1229 ntBASIC15.95■□□□□ 0.14
GCM1Q9NP62 AC005363.2-201ENST00000618631 242 ntBASIC15.95■□□□□ 0.14
GCM1Q9NP62 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.95■□□□□ 0.14
GCM1Q9NP62 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GCM1Q9NP62 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 HMGA1P5-201ENST00000412453 271 ntBASIC15.94■□□□□ 0.14
GCM1Q9NP62 SLC25A3P1-201ENST00000443844 931 ntBASIC15.94■□□□□ 0.14
GCM1Q9NP62 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
GCM1Q9NP62 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
GCM1Q9NP62 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GCM1Q9NP62 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
GCM1Q9NP62 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GCM1Q9NP62 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
GCM1Q9NP62 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.93■□□□□ 0.14
GCM1Q9NP62 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms