Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRDL1Q9BU40 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRDL1Q9BU40 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRDL1Q9BU40 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRDL1Q9BU40 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRDL1Q9BU40 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CHRDL1Q9BU40 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRDL1Q9BU40 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 IRX1P1-201ENST00000438849 1838 ntBASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 FAM201B-201ENST00000458407 597 ntBASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 FER1L4-210ENST00000615531 5998 ntBASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRDL1Q9BU40 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 RPPH1-201ENST00000516869 333 ntBASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CHRDL1Q9BU40 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHRDL1Q9BU40 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHRDL1Q9BU40 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRDL1Q9BU40 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRDL1Q9BU40 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRDL1Q9BU40 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRDL1Q9BU40 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRDL1Q9BU40 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRDL1Q9BU40 PKD1P5-201ENST00000532415 10291 ntBASIC14.83□□□□□ -0.04
CHRDL1Q9BU40 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms