Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 ESPNP-201ENST00000270691 2015 ntBASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 RPS2P55-201ENST00000397318 883 ntBASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 AL596275.1-201ENST00000423464 877 ntBASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 AC107956.1-201ENST00000494359 873 ntBASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 AP000692.2-201ENST00000608391 879 ntBASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERPUD2Q9BSE4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 CD177P1-201ENST00000606252 935 ntBASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERPUD2Q9BSE4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERPUD2Q9BSE4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms