Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.72■□□□□ 0.43
BBS4Q96RK4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BBS4Q96RK4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BBS4Q96RK4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 AC096733.2-201ENST00000609937 1394 ntBASIC17.71■□□□□ 0.43
BBS4Q96RK4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 CRYGFP-201ENST00000418459 633 ntBASIC17.71■□□□□ 0.43
BBS4Q96RK4 AP003071.4-201ENST00000562276 1284 ntBASIC17.71■□□□□ 0.43
BBS4Q96RK4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 AC068587.9-201ENST00000641814 219 ntBASIC17.71■□□□□ 0.43
BBS4Q96RK4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BBS4Q96RK4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.71■□□□□ 0.43
BBS4Q96RK4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
BBS4Q96RK4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BBS4Q96RK4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.7■□□□□ 0.42
BBS4Q96RK4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
BBS4Q96RK4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BBS4Q96RK4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 RCC2P3-201ENST00000418112 1537 ntBASIC17.69■□□□□ 0.42
BBS4Q96RK4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms