Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf72Q96LT7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 RPS2P55-201ENST00000397318 883 ntBASIC19.24■□□□□ 0.67
C9orf72Q96LT7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 AC012618.2-201ENST00000428058 849 ntBASIC19.24■□□□□ 0.67
C9orf72Q96LT7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 AC107956.1-201ENST00000494359 873 ntBASIC19.24■□□□□ 0.67
C9orf72Q96LT7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
C9orf72Q96LT7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 AC233702.5-201ENST00000584107 538 ntBASIC19.23■□□□□ 0.67
C9orf72Q96LT7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.23■□□□□ 0.67
C9orf72Q96LT7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 SNORA78-201ENST00000459373 127 ntBASIC19.22■□□□□ 0.67
C9orf72Q96LT7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 AL160286.2-201ENST00000567150 934 ntBASIC19.22■□□□□ 0.67
C9orf72Q96LT7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 HLA-A-209ENST00000638375 975 ntBASIC19.22■□□□□ 0.67
C9orf72Q96LT7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 AL499627.1-201ENST00000569373 2188 ntBASIC19.22■□□□□ 0.67
C9orf72Q96LT7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf72Q96LT7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf72Q96LT7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms