Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 LINC00896-202ENST00000609602 2128 ntBASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHAMP1Q96JM3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 AL023875.1-201ENST00000640777 796 ntBASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 AC093677.2-201ENST00000600169 1863 ntBASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHAMP1Q96JM3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 MIR4651-201ENST00000582622 73 ntBASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHAMP1Q96JM3 KRT8P32-201ENST00000512863 1461 ntBASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.64■■□□□ 1.06
CHAMP1Q96JM3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 AC069544.1-201ENST00000609399 999 ntBASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 REXO1L9P-201ENST00000604264 2108 ntBASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHAMP1Q96JM3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHAMP1Q96JM3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms