Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RHBDF1Q96CC6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.21■□□□□ 0.5
RHBDF1Q96CC6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
RHBDF1Q96CC6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 UNC93B2-201ENST00000285383 730 ntBASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 AL023284.2-201ENST00000405850 579 ntBASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 KRT8P45-201ENST00000414328 1447 ntBASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RHBDF1Q96CC6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 AC112777.1-201ENST00000540175 1423 ntBASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 AC079598.2-202ENST00000546624 1451 ntBASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RHBDF1Q96CC6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 AC135050.7-201ENST00000624508 2218 ntBASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 SNORA78-201ENST00000459373 127 ntBASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 MYC-208ENST00000641036 567 ntBASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.18■□□□□ 0.5
RHBDF1Q96CC6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms