Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.24■□□□□ 0.35
HTRA1Q92743 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.24■□□□□ 0.35
HTRA1Q92743 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.24■□□□□ 0.35
HTRA1Q92743 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HTRA1Q92743 AP006587.1-201ENST00000534129 1502 ntBASIC17.24■□□□□ 0.35
HTRA1Q92743 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HTRA1Q92743 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HTRA1Q92743 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
HTRA1Q92743 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.24■□□□□ 0.35
HTRA1Q92743 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTRA1Q92743 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.23■□□□□ 0.35
HTRA1Q92743 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.23■□□□□ 0.35
HTRA1Q92743 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
HTRA1Q92743 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HTRA1Q92743 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HTRA1Q92743 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.23■□□□□ 0.35
HTRA1Q92743 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.23■□□□□ 0.35
HTRA1Q92743 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.23■□□□□ 0.35
HTRA1Q92743 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.23■□□□□ 0.35
HTRA1Q92743 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.23■□□□□ 0.35
HTRA1Q92743 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.23■□□□□ 0.35
HTRA1Q92743 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.23■□□□□ 0.35
HTRA1Q92743 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
HTRA1Q92743 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTRA1Q92743 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.22■□□□□ 0.35
HTRA1Q92743 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
HTRA1Q92743 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.22■□□□□ 0.35
HTRA1Q92743 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.22■□□□□ 0.35
HTRA1Q92743 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HTRA1Q92743 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
HTRA1Q92743 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.22■□□□□ 0.35
HTRA1Q92743 AL023875.1-201ENST00000640777 796 ntBASIC17.22■□□□□ 0.35
HTRA1Q92743 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.22■□□□□ 0.35
HTRA1Q92743 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HTRA1Q92743 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.22■□□□□ 0.35
HTRA1Q92743 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.22■□□□□ 0.35
HTRA1Q92743 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HTRA1Q92743 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HTRA1Q92743 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.21■□□□□ 0.35
HTRA1Q92743 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 AL139384.1-201ENST00000612143 3047 ntBASIC17.21■□□□□ 0.35
HTRA1Q92743 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HTRA1Q92743 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
HTRA1Q92743 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms