Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RGP1Q92546 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.32■□□□□ 0.2
RGP1Q92546 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.32■□□□□ 0.2
RGP1Q92546 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.32■□□□□ 0.2
RGP1Q92546 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RGP1Q92546 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.32■□□□□ 0.2
RGP1Q92546 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 KRT8P3-201ENST00000519669 1449 ntBASIC16.32■□□□□ 0.2
RGP1Q92546 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
RGP1Q92546 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.32■□□□□ 0.2
RGP1Q92546 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.32■□□□□ 0.2
RGP1Q92546 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.32■□□□□ 0.2
RGP1Q92546 AC004264.1-201ENST00000608354 794 ntBASIC16.32■□□□□ 0.2
RGP1Q92546 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.32■□□□□ 0.2
RGP1Q92546 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RGP1Q92546 AC134043.2-201ENST00000624206 2238 ntBASIC16.32■□□□□ 0.2
RGP1Q92546 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.32■□□□□ 0.2
RGP1Q92546 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RGP1Q92546 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RGP1Q92546 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RGP1Q92546 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RGP1Q92546 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
RGP1Q92546 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.31■□□□□ 0.2
RGP1Q92546 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RGP1Q92546 AC112777.1-201ENST00000540175 1423 ntBASIC16.31■□□□□ 0.2
RGP1Q92546 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.31■□□□□ 0.2
RGP1Q92546 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 UNC93B5-201ENST00000530315 699 ntBASIC16.31■□□□□ 0.2
RGP1Q92546 AC092666.2-201ENST00000613287 246 ntBASIC16.31■□□□□ 0.2
RGP1Q92546 AC133041.1-202ENST00000642053 222 ntBASIC16.31■□□□□ 0.2
RGP1Q92546 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
RGP1Q92546 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RGP1Q92546 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RGP1Q92546 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.3■□□□□ 0.2
RGP1Q92546 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 AC008556.1-201ENST00000610908 2040 ntBASIC16.3■□□□□ 0.2
RGP1Q92546 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.3■□□□□ 0.2
RGP1Q92546 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.3■□□□□ 0.2
RGP1Q92546 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.3■□□□□ 0.2
RGP1Q92546 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RGP1Q92546 AC233263.1-201ENST00000578059 224 ntBASIC16.3■□□□□ 0.2
RGP1Q92546 MTDHP1-201ENST00000605323 784 ntBASIC16.3■□□□□ 0.2
RGP1Q92546 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.3■□□□□ 0.2
RGP1Q92546 MYC-208ENST00000641036 567 ntBASIC16.3■□□□□ 0.2
RGP1Q92546 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RGP1Q92546 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.3■□□□□ 0.2
RGP1Q92546 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RGP1Q92546 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms