Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 AC141586.3-201ENST00000562166 1838 ntBASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 AP002469.2-201ENST00000531724 424 ntBASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 AC009065.1-201ENST00000564055 1225 ntBASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 AL353801.3-201ENST00000609898 542 ntBASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 IGHV3-47-201ENST00000425060 335 ntBASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 RN7SL606P-201ENST00000472779 293 ntBASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF4Q8WZA2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
RAPGEF4Q8WZA2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.45■■□□□ 1.51
RAPGEF4Q8WZA2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RAPGEF4Q8WZA2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
RAPGEF4Q8WZA2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 KRT16P4-201ENST00000453883 522 ntBASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 AL121912.1-201ENST00000603683 238 ntBASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC24.45■■□□□ 1.5
RAPGEF4Q8WZA2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 AL022342.1-201ENST00000400363 863 ntBASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 AC106795.1-205ENST00000512851 1056 ntBASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 SLC25A6P4-201ENST00000586535 553 ntBASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.44■■□□□ 1.5
RAPGEF4Q8WZA2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 VENTXP7-201ENST00000475503 772 ntBASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.43■■□□□ 1.5
RAPGEF4Q8WZA2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms