Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL121906.2-201ENST00000621597 723 ntBASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAB40AQ8WXH6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 AC124283.5-201ENST00000624661 1809 ntBASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40AQ8WXH6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 AC067852.2-201ENST00000590513 2313 ntBASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms