Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 FITM1-202ENST00000559294 800 ntBASIC18.24■□□□□ 0.51
ATL1Q8WXF7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.24■□□□□ 0.51
ATL1Q8WXF7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 MTMR9LP-203ENST00000426597 1545 ntBASIC18.23■□□□□ 0.51
ATL1Q8WXF7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.23■□□□□ 0.51
ATL1Q8WXF7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.22■□□□□ 0.51
ATL1Q8WXF7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 AC079598.2-202ENST00000546624 1451 ntBASIC18.22■□□□□ 0.51
ATL1Q8WXF7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 MCCD1P1-208ENST00000445732 328 ntBASIC18.22■□□□□ 0.51
ATL1Q8WXF7 CCR12P-201ENST00000446203 998 ntBASIC18.22■□□□□ 0.51
ATL1Q8WXF7 TSPY17P-201ENST00000450329 467 ntBASIC18.22■□□□□ 0.51
ATL1Q8WXF7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 C2orf69P3-201ENST00000565542 1120 ntBASIC18.22■□□□□ 0.51
ATL1Q8WXF7 AP000525.1-201ENST00000608286 694 ntBASIC18.22■□□□□ 0.51
ATL1Q8WXF7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.22■□□□□ 0.51
ATL1Q8WXF7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 AC090340.1-201ENST00000620778 4980 ntBASIC18.21■□□□□ 0.51
ATL1Q8WXF7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.21■□□□□ 0.51
ATL1Q8WXF7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 AL355075.4-201ENST00000554988 638 ntBASIC18.21■□□□□ 0.51
ATL1Q8WXF7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 AC008622.2-201ENST00000617006 1229 ntBASIC18.21■□□□□ 0.51
ATL1Q8WXF7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms