Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF139Q8WU17 AL109659.2-201ENST00000606809 1674 ntBASIC19.6■□□□□ 0.73
RNF139Q8WU17 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF139Q8WU17 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 AP000523.1-201ENST00000398242 1049 ntBASIC19.6■□□□□ 0.73
RNF139Q8WU17 AC009947.2-201ENST00000444014 672 ntBASIC19.6■□□□□ 0.73
RNF139Q8WU17 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 WWOX-216ENST00000569818 525 ntBASIC19.6■□□□□ 0.73
RNF139Q8WU17 AC140113.3-201ENST00000605663 199 ntBASIC19.6■□□□□ 0.73
RNF139Q8WU17 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF139Q8WU17 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF139Q8WU17 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF139Q8WU17 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF139Q8WU17 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF139Q8WU17 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF139Q8WU17 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.59■□□□□ 0.73
RNF139Q8WU17 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 AL031432.5-201ENST00000641059 760 ntBASIC19.59■□□□□ 0.73
RNF139Q8WU17 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNF139Q8WU17 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RNF139Q8WU17 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF139Q8WU17 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
RNF139Q8WU17 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
RNF139Q8WU17 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF139Q8WU17 AC093503.3-201ENST00000624917 2352 ntBASIC19.58■□□□□ 0.73
RNF139Q8WU17 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 AC004408.2-201ENST00000623613 2777 ntBASIC19.58■□□□□ 0.73
RNF139Q8WU17 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF139Q8WU17 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF139Q8WU17 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RNF139Q8WU17 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RNF139Q8WU17 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.58■□□□□ 0.72
RNF139Q8WU17 AK4P3-201ENST00000418260 669 ntBASIC19.58■□□□□ 0.72
RNF139Q8WU17 AC104076.2-201ENST00000448912 469 ntBASIC19.58■□□□□ 0.72
RNF139Q8WU17 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF139Q8WU17 AL049597.2-201ENST00000565575 961 ntBASIC19.58■□□□□ 0.72
RNF139Q8WU17 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF139Q8WU17 AC139887.4-201ENST00000607877 719 ntBASIC19.58■□□□□ 0.72
RNF139Q8WU17 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RNF139Q8WU17 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 CROCCP3-202ENST00000420820 1947 ntBASIC19.58■□□□□ 0.72
RNF139Q8WU17 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF139Q8WU17 AC008556.1-201ENST00000610908 2040 ntBASIC19.58■□□□□ 0.72
RNF139Q8WU17 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 NEK4P2-201ENST00000580004 1012 ntBASIC19.57■□□□□ 0.72
RNF139Q8WU17 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms