Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 KRT8P50-201ENST00000562022 1438 ntBASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 PVRIG2P-201ENST00000435460 978 ntBASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 BX276092.5-203ENST00000456199 560 ntBASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 AL121672.3-201ENST00000608644 468 ntBASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3RF3Q8TEJ3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 MIR3180-1-201ENST00000580374 94 ntBASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 MIR3180-3-201ENST00000584616 94 ntBASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.15■■□□□ 1.14
SH3RF3Q8TEJ3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.14■■□□□ 1.14
SH3RF3Q8TEJ3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 AC083906.6-201ENST00000641366 219 ntBASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.14■■□□□ 1.13
SH3RF3Q8TEJ3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 TSPY22P-201ENST00000427496 604 ntBASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 KRT8P26-201ENST00000534154 1276 ntBASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 MIR3180-4-201ENST00000582223 153 ntBASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 AL121894.2-201ENST00000602977 491 ntBASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3RF3Q8TEJ3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms