Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 RPS2P55-201ENST00000397318 883 ntBASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 AC107956.1-201ENST00000494359 873 ntBASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 AC090164.3-201ENST00000610780 2143 ntBASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 AC005082.1-201ENST00000413042 2259 ntBASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP1Q8TDR0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 ABHD17AP1-201ENST00000358206 933 ntBASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 AC012618.2-201ENST00000428058 849 ntBASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 AP000692.2-201ENST00000608391 879 ntBASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 KRT8P32-201ENST00000512863 1461 ntBASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP1Q8TDR0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 NUDT16P1-203ENST00000513809 620 ntBASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 AC068587.9-201ENST00000641814 219 ntBASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 AC009113.1-201ENST00000570267 2443 ntBASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 NEFHP1-201ENST00000412845 2629 ntBASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF3IP1Q8TDR0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP1Q8TDR0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF3IP1Q8TDR0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms