Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PMFBP1Q8TBY8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PMFBP1Q8TBY8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PMFBP1Q8TBY8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.69■■□□□ 1.7
PMFBP1Q8TBY8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 AKR1C7P-201ENST00000305623 895 ntBASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 KRT8P7-201ENST00000533003 1432 ntBASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC25.68■■□□□ 1.7
PMFBP1Q8TBY8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 MIR564-202ENST00000385049 94 ntBASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMFBP1Q8TBY8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 TSPY12P-201ENST00000421279 868 ntBASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 IGHV3-47-201ENST00000425060 335 ntBASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 AL671883.3-201ENST00000603274 991 ntBASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PMFBP1Q8TBY8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 HLA-A-201ENST00000376802 1334 ntBASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 PCDHAC2-203ENST00000615316 3011 ntBASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PMFBP1Q8TBY8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PMFBP1Q8TBY8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
PMFBP1Q8TBY8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PMFBP1Q8TBY8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
PMFBP1Q8TBY8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC25.64■■□□□ 1.7
PMFBP1Q8TBY8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PMFBP1Q8TBY8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms