Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 AC010947.1-201ENST00000623454 693 ntBASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 NAPSB-206ENST00000562112 1266 ntBASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 AC083906.6-201ENST00000641366 219 ntBASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCLL1Q8TB92 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 CYP2D8P-201ENST00000433633 1490 ntBASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCLL1Q8TB92 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 TSPY17P-201ENST00000450329 467 ntBASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLL1Q8TB92 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 CCR12P-201ENST00000446203 998 ntBASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 AC012306.2-201ENST00000609350 630 ntBASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 AC092338.2-201ENST00000568827 1415 ntBASIC18.32■□□□□ 0.52
HMGCLL1Q8TB92 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms