Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AC112907.2-201ENST00000448639 330 ntBASIC21.15■□□□□ 0.98
RETREG2Q8NC44 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 CROCCP3-202ENST00000420820 1947 ntBASIC21.15■□□□□ 0.98
RETREG2Q8NC44 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
RETREG2Q8NC44 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RETREG2Q8NC44 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RETREG2Q8NC44 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RETREG2Q8NC44 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RETREG2Q8NC44 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RETREG2Q8NC44 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RETREG2Q8NC44 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 ZNF444P1-201ENST00000559497 298 ntBASIC21.14■□□□□ 0.97
RETREG2Q8NC44 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 NEK4P2-201ENST00000580004 1012 ntBASIC21.14■□□□□ 0.97
RETREG2Q8NC44 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RETREG2Q8NC44 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 AC026396.1-201ENST00000419388 421 ntBASIC21.13■□□□□ 0.97
RETREG2Q8NC44 TSPY23P-201ENST00000440136 739 ntBASIC21.13■□□□□ 0.97
RETREG2Q8NC44 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 CLEC4GP1-201ENST00000596555 870 ntBASIC21.13■□□□□ 0.97
RETREG2Q8NC44 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.13■□□□□ 0.97
RETREG2Q8NC44 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 TEX21P-204ENST00000641479 1693 ntBASIC21.12■□□□□ 0.97
RETREG2Q8NC44 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RETREG2Q8NC44 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 STARP1-201ENST00000397973 869 ntBASIC21.11■□□□□ 0.97
RETREG2Q8NC44 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms