Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AK4P3-201ENST00000418260 669 ntBASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 AC009947.2-201ENST00000444014 672 ntBASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 YBX1P2-201ENST00000489612 999 ntBASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 MIR3180-5-201ENST00000583743 153 ntBASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 AC139887.4-201ENST00000607877 719 ntBASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 AL590326.2-201ENST00000625139 305 ntBASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH20Q8N6Y1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 AL109659.2-201ENST00000606809 1674 ntBASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 RNF152P1-201ENST00000397754 604 ntBASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH20Q8N6Y1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 RCC2P3-201ENST00000418112 1537 ntBASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 KRT8P32-201ENST00000512863 1461 ntBASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 AC140113.3-201ENST00000605663 199 ntBASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 AC036111.1-201ENST00000533973 1582 ntBASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH20Q8N6Y1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms