Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCML4Q8N228 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.41■□□□□ 0.7
SCML4Q8N228 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SCML4Q8N228 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCML4Q8N228 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.41■□□□□ 0.7
SCML4Q8N228 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
SCML4Q8N228 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCML4Q8N228 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCML4Q8N228 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCML4Q8N228 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCML4Q8N228 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCML4Q8N228 MYLKP1-201ENST00000509077 1580 ntBASIC19.4■□□□□ 0.7
SCML4Q8N228 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 SPDYE15P-201ENST00000424157 909 ntBASIC19.4■□□□□ 0.7
SCML4Q8N228 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 KRT18P38-201ENST00000449496 1282 ntBASIC19.4■□□□□ 0.7
SCML4Q8N228 AC092647.4-201ENST00000457211 535 ntBASIC19.4■□□□□ 0.7
SCML4Q8N228 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCML4Q8N228 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCML4Q8N228 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 AL163051.1-201ENST00000569214 1512 ntBASIC19.4■□□□□ 0.7
SCML4Q8N228 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCML4Q8N228 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCML4Q8N228 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SCML4Q8N228 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCML4Q8N228 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCML4Q8N228 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCML4Q8N228 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCML4Q8N228 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SCML4Q8N228 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.39■□□□□ 0.69
SCML4Q8N228 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 MIR1224-201ENST00000408193 85 ntBASIC19.39■□□□□ 0.69
SCML4Q8N228 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCML4Q8N228 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.39■□□□□ 0.69
SCML4Q8N228 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.39■□□□□ 0.69
SCML4Q8N228 HYMAI.1-201ENST00000620949 238 ntBASIC19.39■□□□□ 0.69
SCML4Q8N228 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCML4Q8N228 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.39■□□□□ 0.69
SCML4Q8N228 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCML4Q8N228 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCML4Q8N228 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SCML4Q8N228 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SCML4Q8N228 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SCML4Q8N228 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 TNXA-203ENST00000507684 2038 ntBASIC19.38■□□□□ 0.69
SCML4Q8N228 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.38■□□□□ 0.69
SCML4Q8N228 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.38■□□□□ 0.69
SCML4Q8N228 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SCML4Q8N228 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.38■□□□□ 0.69
SCML4Q8N228 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.38■□□□□ 0.69
SCML4Q8N228 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.38■□□□□ 0.69
SCML4Q8N228 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.38■□□□□ 0.69
SCML4Q8N228 AC010331.1-201ENST00000611423 582 ntBASIC19.38■□□□□ 0.69
SCML4Q8N228 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCML4Q8N228 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SCML4Q8N228 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SCML4Q8N228 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCML4Q8N228 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms