Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 MTDHP1-201ENST00000605323 784 ntBASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 HCG11-201ENST00000411553 5696 ntBASIC20.09■□□□□ 0.81
CCDC170Q8IYT3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 AC008403.3-201ENST00000598924 454 ntBASIC20.08■□□□□ 0.81
CCDC170Q8IYT3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC170Q8IYT3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC170Q8IYT3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC170Q8IYT3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC170Q8IYT3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CCDC170Q8IYT3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 AC142086.2-201ENST00000569753 217 ntBASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC170Q8IYT3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 LTB4R2-202ENST00000528054 3092 ntBASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 AL109923.1-201ENST00000618799 583 ntBASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 AL445675.2-201ENST00000620291 557 ntBASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC170Q8IYT3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms