Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AL023284.2-201ENST00000405850 579 ntBASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 SLC25A1P2-201ENST00000430693 912 ntBASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 RBM17P1-201ENST00000453646 1190 ntBASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 AC008622.2-201ENST00000617006 1229 ntBASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 AC005082.1-201ENST00000413042 2259 ntBASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF440Q8IYI8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 MIR564-202ENST00000385049 94 ntBASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 AP000593.1-201ENST00000393668 712 ntBASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF440Q8IYI8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 TSPY7P-201ENST00000431358 1114 ntBASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 TSPY17P-201ENST00000450329 467 ntBASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF440Q8IYI8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 AC008556.1-201ENST00000610908 2040 ntBASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF440Q8IYI8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms