Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 INGX-201ENST00000359239 846 ntBASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 CCR12P-201ENST00000446203 998 ntBASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.27■□□□□ 0.83
ZC3H3Q8IXZ2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H3Q8IXZ2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H3Q8IXZ2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.27■□□□□ 0.83
ZC3H3Q8IXZ2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.27■□□□□ 0.83
ZC3H3Q8IXZ2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 CYP2D8P-201ENST00000433633 1490 ntBASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 EGLN1P1-201ENST00000531623 762 ntBASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 BX088651.1-201ENST00000540551 451 ntBASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 AC010947.1-201ENST00000623454 693 ntBASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 AC116562.4-202ENST00000641738 218 ntBASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 KRT8P7-201ENST00000533003 1432 ntBASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZC3H3Q8IXZ2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 C2orf69P3-201ENST00000565542 1120 ntBASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 AC135776.1-201ENST00000319817 2481 ntBASIC20.25■□□□□ 0.83
ZC3H3Q8IXZ2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 ESPNP-201ENST00000270691 2015 ntBASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H3Q8IXZ2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H3Q8IXZ2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H3Q8IXZ2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms