Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HMGN1P19-201ENST00000436976 333 ntBASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AC099778.1-201ENST00000568593 1911 ntBASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AC020907.5-201ENST00000624372 1936 ntBASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 Z83836.1-201ENST00000624605 1642 ntBASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AL136038.4-201ENST00000603606 1261 ntBASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AL353801.3-201ENST00000609898 542 ntBASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AL121772.3-201ENST00000610840 674 ntBASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 AC027601.4-201ENST00000611259 610 ntBASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RP1L1Q8IWN7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 AC112497.1-201ENST00000624824 639 ntBASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 MIR1233-2-201ENST00000408138 82 ntBASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 MIR1233-1-201ENST00000408722 82 ntBASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 LINC00265-3P-201ENST00000447588 903 ntBASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 AC138894.3-201ENST00000603787 634 ntBASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RP1L1Q8IWN7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 SDHAP1-207ENST00000440850 2000 ntBASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 POLD2P1-201ENST00000511220 997 ntBASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RP1L1Q8IWN7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms