Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 MESTP1-201ENST00000404287 994 ntBASIC17.22■□□□□ 0.35
ZNF550Q7Z398 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 FAM210CP-201ENST00000445714 574 ntBASIC17.22■□□□□ 0.35
ZNF550Q7Z398 AC116562.2-201ENST00000507042 360 ntBASIC17.22■□□□□ 0.35
ZNF550Q7Z398 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 AC090164.3-201ENST00000610780 2143 ntBASIC17.21■□□□□ 0.35
ZNF550Q7Z398 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.21■□□□□ 0.35
ZNF550Q7Z398 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 REXO1L10P-201ENST00000615707 1290 ntBASIC17.21■□□□□ 0.35
ZNF550Q7Z398 MYC-208ENST00000641036 567 ntBASIC17.21■□□□□ 0.35
ZNF550Q7Z398 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF550Q7Z398 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF550Q7Z398 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF550Q7Z398 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.21■□□□□ 0.34
ZNF550Q7Z398 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF550Q7Z398 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.21■□□□□ 0.34
ZNF550Q7Z398 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF550Q7Z398 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.2■□□□□ 0.34
ZNF550Q7Z398 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 AC096733.2-201ENST00000609937 1394 ntBASIC17.2■□□□□ 0.34
ZNF550Q7Z398 MMP23A-201ENST00000234610 1017 ntBASIC17.2■□□□□ 0.34
ZNF550Q7Z398 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 RBM17P1-201ENST00000453646 1190 ntBASIC17.2■□□□□ 0.34
ZNF550Q7Z398 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 MTMR9LP-203ENST00000426597 1545 ntBASIC17.2■□□□□ 0.34
ZNF550Q7Z398 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
ZNF550Q7Z398 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF550Q7Z398 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF550Q7Z398 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF550Q7Z398 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF550Q7Z398 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms