Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 KRT8P50-201ENST00000562022 1438 ntBASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COLCA1Q6ZS62 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 FAM87A-204ENST00000613235 858 ntBASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COLCA1Q6ZS62 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
COLCA1Q6ZS62 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms