Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.9■□□□□ 0.62
PACS1Q6VY07 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PACS1Q6VY07 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.9■□□□□ 0.62
PACS1Q6VY07 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PACS1Q6VY07 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PACS1Q6VY07 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.9■□□□□ 0.62
PACS1Q6VY07 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PACS1Q6VY07 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PACS1Q6VY07 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PACS1Q6VY07 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PACS1Q6VY07 KRT8P11-201ENST00000409686 1436 ntBASIC18.9■□□□□ 0.62
PACS1Q6VY07 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PACS1Q6VY07 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PACS1Q6VY07 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PACS1Q6VY07 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.89■□□□□ 0.62
PACS1Q6VY07 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PACS1Q6VY07 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.89■□□□□ 0.61
PACS1Q6VY07 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 NOC2LP1-202ENST00000452600 2235 ntBASIC18.88■□□□□ 0.61
PACS1Q6VY07 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 AC008040.2-201ENST00000461049 708 ntBASIC18.88■□□□□ 0.61
PACS1Q6VY07 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 DGCR10-201ENST00000609839 495 ntBASIC18.88■□□□□ 0.61
PACS1Q6VY07 AC026471.5-201ENST00000615068 467 ntBASIC18.88■□□□□ 0.61
PACS1Q6VY07 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PACS1Q6VY07 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PACS1Q6VY07 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PACS1Q6VY07 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PACS1Q6VY07 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PACS1Q6VY07 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.87■□□□□ 0.61
PACS1Q6VY07 FAM207BP-201ENST00000447172 505 ntBASIC18.87■□□□□ 0.61
PACS1Q6VY07 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.87■□□□□ 0.61
PACS1Q6VY07 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 AP000692.2-201ENST00000608391 879 ntBASIC18.87■□□□□ 0.61
PACS1Q6VY07 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.87■□□□□ 0.61
PACS1Q6VY07 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
PACS1Q6VY07 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PACS1Q6VY07 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms