Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN4Q6PJG9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
LRFN4Q6PJG9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN4Q6PJG9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 NUDT16P1-203ENST00000513809 620 ntBASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
LRFN4Q6PJG9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 AL133373.2-201ENST00000623187 2828 ntBASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 PRSS44-201ENST00000515154 1146 ntBASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRFN4Q6PJG9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 FAM207BP-201ENST00000447172 505 ntBASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 AP000692.2-201ENST00000608391 879 ntBASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 AP006294.2-201ENST00000641667 209 ntBASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.8■□□□□ 0.28
LRFN4Q6PJG9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms