Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 AL031598.1-201ENST00000561511 1773 ntBASIC16.27■□□□□ 0.2
C11orf88Q6PI97 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C11orf88Q6PI97 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C11orf88Q6PI97 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 AC060766.5-201ENST00000590539 871 ntBASIC16.26■□□□□ 0.19
C11orf88Q6PI97 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C11orf88Q6PI97 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 KRT17P1-201ENST00000399211 1546 ntBASIC16.25■□□□□ 0.19
C11orf88Q6PI97 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 AC008687.6-201ENST00000596318 630 ntBASIC16.25■□□□□ 0.19
C11orf88Q6PI97 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
C11orf88Q6PI97 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms