Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 DUX4L17-201ENST00000557360 1267 ntBASIC18.1■□□□□ 0.49
RIF1Q5UIP0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 KRT18P2-201ENST00000447938 1258 ntBASIC18.1■□□□□ 0.49
RIF1Q5UIP0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.09■□□□□ 0.49
RIF1Q5UIP0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 AC025062.2-201ENST00000605477 670 ntBASIC18.09■□□□□ 0.49
RIF1Q5UIP0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 C20orf181-201ENST00000623918 480 ntBASIC18.09■□□□□ 0.49
RIF1Q5UIP0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.09■□□□□ 0.49
RIF1Q5UIP0 AC233723.2-201ENST00000623798 2106 ntBASIC18.08■□□□□ 0.49
RIF1Q5UIP0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RIF1Q5UIP0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RIF1Q5UIP0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RIF1Q5UIP0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
RIF1Q5UIP0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RIF1Q5UIP0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RIF1Q5UIP0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.08■□□□□ 0.49
RIF1Q5UIP0 MEIS3P1-201ENST00000495167 958 ntBASIC18.08■□□□□ 0.49
RIF1Q5UIP0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.08■□□□□ 0.49
RIF1Q5UIP0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AL356309.3-201ENST00000624132 1934 ntBASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC015922.1-201ENST00000421102 1152 ntBASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC092474.2-201ENST00000424288 719 ntBASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC009947.1-201ENST00000444350 727 ntBASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC104390.1-201ENST00000555663 520 ntBASIC18.08■□□□□ 0.48
RIF1Q5UIP0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIF1Q5UIP0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 AC092910.1-201ENST00000482027 1129 ntBASIC18.07■□□□□ 0.48
RIF1Q5UIP0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 AL008721.1-201ENST00000609964 604 ntBASIC18.07■□□□□ 0.48
RIF1Q5UIP0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 AL109659.2-201ENST00000606809 1674 ntBASIC18.07■□□□□ 0.48
RIF1Q5UIP0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RIF1Q5UIP0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RIF1Q5UIP0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
RIF1Q5UIP0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RIF1Q5UIP0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RIF1Q5UIP0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms