Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 HTR7P1-201ENST00000538670 1336 ntBASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.22■□□□□ 0.19
ATPAF1Q5TC12 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATPAF1Q5TC12 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATPAF1Q5TC12 AC067852.2-201ENST00000590513 2313 ntBASIC16.2■□□□□ 0.18
ATPAF1Q5TC12 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms