Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
ATP6AP1LQ52LC2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
ATP6AP1LQ52LC2 AL162741.1-201ENST00000565563 1558 ntBASIC18.08■□□□□ 0.49
ATP6AP1LQ52LC2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.08■□□□□ 0.49
ATP6AP1LQ52LC2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATP6AP1LQ52LC2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.08■□□□□ 0.49
ATP6AP1LQ52LC2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 AL133373.2-201ENST00000623187 2828 ntBASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP6AP1LQ52LC2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 MYC-208ENST00000641036 567 ntBASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 AL499627.1-201ENST00000569373 2188 ntBASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 KRT8P32-201ENST00000512863 1461 ntBASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6AP1LQ52LC2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 AC124016.1-201ENST00000609552 612 ntBASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 AC110285.5-201ENST00000611501 352 ntBASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6AP1LQ52LC2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms