Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCS1Q01581 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCS1Q01581 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 FAM197Y1-201ENST00000421178 764 ntBASIC18.02■□□□□ 0.48
HMGCS1Q01581 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCS1Q01581 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 B3GAT3P1-201ENST00000471720 806 ntBASIC18.02■□□□□ 0.48
HMGCS1Q01581 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGCS1Q01581 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCS1Q01581 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCS1Q01581 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.02■□□□□ 0.47
HMGCS1Q01581 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.02■□□□□ 0.47
HMGCS1Q01581 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HMGCS1Q01581 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCS1Q01581 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCS1Q01581 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 AL357033.4-201ENST00000617703 1807 ntBASIC18.01■□□□□ 0.47
HMGCS1Q01581 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 MESTP1-201ENST00000404287 994 ntBASIC18.01■□□□□ 0.47
HMGCS1Q01581 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.01■□□□□ 0.47
HMGCS1Q01581 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCS1Q01581 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGCS1Q01581 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18■□□□□ 0.47
HMGCS1Q01581 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18■□□□□ 0.47
HMGCS1Q01581 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18■□□□□ 0.47
HMGCS1Q01581 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18■□□□□ 0.47
HMGCS1Q01581 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 RCC2P3-201ENST00000418112 1537 ntBASIC18■□□□□ 0.47
HMGCS1Q01581 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCS1Q01581 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms