Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.02□□□□□ -0.493e-6■□□□□ 9.5
LSM11P83369 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.583e-6■□□□□ 9.4
LSM11P83369 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.25e-6■□□□□ 9.4
LSM11P83369 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.065e-6■□□□□ 9.4
LSM11P83369 FBXL6-203ENST00000524492 2007 ntTSL 217.13■□□□□ 0.335e-6■□□□□ 9.4
LSM11P83369 FBXL6-208ENST00000530142 3108 ntTSL 1 (best)16■□□□□ 0.155e-6■□□□□ 9.4
LSM11P83369 FBXL6-205ENST00000526524 697 ntTSL 314.77□□□□□ -0.055e-6■□□□□ 9.4
LSM11P83369 FBXL6-204ENST00000524909 490 ntTSL 314.33□□□□□ -0.125e-6■□□□□ 9.4
LSM11P83369 FAM102A-201ENST00000300434 3148 ntTSL 1 (best)13.51□□□□□ -0.254e-8■□□□□ 9.4
LSM11P83369 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.16□□□□□ -0.464e-8■□□□□ 9.4
LSM11P83369 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.564e-8■□□□□ 9.4
LSM11P83369 FAM102A-204ENST00000465821 4316 ntTSL 210.87□□□□□ -0.674e-8■□□□□ 9.4
LSM11P83369 FBXL6-206ENST00000527000 604 ntTSL 310.68□□□□□ -0.75e-6■□□□□ 9.4
LSM11P83369 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.96□□□□□ -0.013e-15■□□□□ 9.4
LSM11P83369 MTCH1-205ENST00000471737 629 ntTSL 211.71□□□□□ -0.533e-15■□□□□ 9.4
LSM11P83369 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC11.5□□□□□ -0.573e-15■□□□□ 9.4
LSM11P83369 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.663e-15■□□□□ 9.4
LSM11P83369 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.492e-6■□□□□ 9.4
LSM11P83369 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.23□□□□□ -0.612e-6■□□□□ 9.4
LSM11P83369 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.259e-8■□□□□ 9.4
LSM11P83369 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.13□□□□□ -0.159e-8■□□□□ 9.4
LSM11P83369 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.73□□□□□ -0.379e-8■□□□□ 9.4
LSM11P83369 PRC1-209ENST00000556129 583 ntTSL 316.73■□□□□ 0.273e-10■□□□□ 9.4
LSM11P83369 PRC1-207ENST00000555745 582 ntTSL 316.42■□□□□ 0.223e-10■□□□□ 9.4
LSM11P83369 PRC1-213ENST00000557905 571 ntTSL 414.93□□□□□ -0.023e-10■□□□□ 9.4
LSM11P83369 PRC1-203ENST00000417173 1215 ntTSL 214.45□□□□□ -0.13e-10■□□□□ 9.4
LSM11P83369 PRC1-212ENST00000557763 933 ntTSL 513.81□□□□□ -0.23e-10■□□□□ 9.4
LSM11P83369 PRC1-215ENST00000559811 414 ntTSL 313.8□□□□□ -0.23e-10■□□□□ 9.4
LSM11P83369 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.35□□□□□ -0.273e-10■□□□□ 9.4
LSM11P83369 PRC1-205ENST00000553494 717 ntTSL 313.01□□□□□ -0.333e-10■□□□□ 9.4
LSM11P83369 PRC1-218ENST00000560605 576 ntTSL 411.85□□□□□ -0.513e-10■□□□□ 9.4
LSM11P83369 PRC1-208ENST00000555791 660 ntTSL 411.32□□□□□ -0.63e-10■□□□□ 9.4
LSM11P83369 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.713e-10■□□□□ 9.4
LSM11P83369 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC10.28□□□□□ -0.763e-10■□□□□ 9.4
LSM11P83369 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.39□□□□□ -0.591e-323■□□□□ 9.4
LSM11P83369 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.245e-6■□□□□ 9.4
LSM11P83369 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC12.53□□□□□ -0.45e-6■□□□□ 9.4
LSM11P83369 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -03e-6■□□□□ 9.4
LSM11P83369 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.075e-7■□□□□ 9.4
LSM11P83369 LCAT-205ENST00000573538 1083 ntTSL 313.67□□□□□ -0.225e-7■□□□□ 9.4
LSM11P83369 LCAT-202ENST00000570369 348 ntTSL 210.78□□□□□ -0.685e-7■□□□□ 9.4
LSM11P83369 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.523e-8■□□□□ 9.4
LSM11P83369 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.323e-8■□□□□ 9.4
LSM11P83369 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.263e-8■□□□□ 9.4
LSM11P83369 CLDND2-202ENST00000593841 417 ntTSL 516.65■□□□□ 0.263e-8■□□□□ 9.4
LSM11P83369 SRSF1-203ENST00000581497 438 ntTSL 313.31□□□□□ -0.284e-12■□□□□ 9.4
LSM11P83369 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.85□□□□□ -0.354e-12■□□□□ 9.4
LSM11P83369 CYC1-202ENST00000525122 543 ntTSL 211.43□□□□□ -0.582e-18■□□□□ 9.4
LSM11P83369 ACSF2-218ENST00000510410 1745 ntTSL 222.79■■□□□ 1.243e-6■□□□□ 9.4
LSM11P83369 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.55■■□□□ 1.043e-6■□□□□ 9.4
LSM11P83369 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.933e-6■□□□□ 9.4
LSM11P83369 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.893e-6■□□□□ 9.4
LSM11P83369 CHTF18-216ENST00000565787 607 ntTSL 520.58■□□□□ 0.893e-6■□□□□ 9.4
LSM11P83369 CHTF18-204ENST00000440239 1801 ntTSL 1 (best)20.57■□□□□ 0.883e-6■□□□□ 9.4
LSM11P83369 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.683e-6■□□□□ 9.4
LSM11P83369 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.443e-6■□□□□ 9.4
LSM11P83369 CHTF18-218ENST00000569270 711 ntTSL 516.78■□□□□ 0.283e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-211ENST00000519531 1490 ntTSL 316.07■□□□□ 0.163e-6■□□□□ 9.4
LSM11P83369 PLA2G4B-206ENST00000569354 264 ntTSL 215.69■□□□□ 0.13e-6■□□□□ 9.4
LSM11P83369 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.063e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.34■□□□□ 0.053e-6■□□□□ 9.4
LSM11P83369 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.16■□□□□ 0.023e-6■□□□□ 9.4
LSM11P83369 PLA2G4B-204ENST00000483748 3035 ntTSL 214.85□□□□□ -0.033e-6■□□□□ 9.4
LSM11P83369 ACSF2-224ENST00000513544 497 ntTSL 514.83□□□□□ -0.043e-6■□□□□ 9.4
LSM11P83369 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.063e-6■□□□□ 9.4
LSM11P83369 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.68□□□□□ -0.063e-6■□□□□ 9.4
LSM11P83369 GMPR2-207ENST00000558007 469 ntTSL 214.37□□□□□ -0.113e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-215ENST00000522403 995 ntTSL 514.28□□□□□ -0.123e-6■□□□□ 9.4
LSM11P83369 GMPR2-211ENST00000558748 657 ntTSL 314.24□□□□□ -0.133e-6■□□□□ 9.4
LSM11P83369 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.163e-6■□□□□ 9.4
LSM11P83369 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.23e-6■□□□□ 9.4
LSM11P83369 GMPR2-229ENST00000561038 2160 ntTSL 1 (best)13.7□□□□□ -0.223e-6■□□□□ 9.4
LSM11P83369 GMPR2-209ENST00000558483 857 ntTSL 313.21□□□□□ -0.293e-6■□□□□ 9.4
LSM11P83369 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.19□□□□□ -0.33e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-221ENST00000549047 1040 ntTSL 513.11□□□□□ -0.313e-6■□□□□ 9.4
LSM11P83369 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.07□□□□□ -0.323e-6■□□□□ 9.4
LSM11P83369 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.323e-6■□□□□ 9.4
LSM11P83369 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.333e-6■□□□□ 9.4
LSM11P83369 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.94□□□□□ -0.343e-6■□□□□ 9.4
LSM11P83369 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)12.85□□□□□ -0.353e-6■□□□□ 9.4
LSM11P83369 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.363e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-219ENST00000524192 980 ntTSL 212.72□□□□□ -0.373e-6■□□□□ 9.4
LSM11P83369 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.66□□□□□ -0.383e-6■□□□□ 9.4
LSM11P83369 ACSF2-221ENST00000512119 598 ntTSL 312.38□□□□□ -0.433e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-218ENST00000523460 572 ntTSL 412.21□□□□□ -0.453e-6■□□□□ 9.4
LSM11P83369 GSTA4-203ENST00000370963 1334 ntAPPRIS P1 TSL 1 (best)12.16□□□□□ -0.463e-6■□□□□ 9.4
LSM11P83369 ACSF2-219ENST00000511147 375 ntTSL 312.11□□□□□ -0.473e-6■□□□□ 9.4
LSM11P83369 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC11.88□□□□□ -0.513e-6■□□□□ 9.4
LSM11P83369 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC11.87□□□□□ -0.513e-6■□□□□ 9.4
LSM11P83369 ARFGAP1-206ENST00000518601 905 ntTSL 511.69□□□□□ -0.543e-6■□□□□ 9.4
LSM11P83369 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.573e-6■□□□□ 9.4
LSM11P83369 FAM192A-213ENST00000566403 1396 ntTSL 511.42□□□□□ -0.583e-6■□□□□ 9.4
LSM11P83369 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC11.27□□□□□ -0.63e-6■□□□□ 9.4
LSM11P83369 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.613e-6■□□□□ 9.4
LSM11P83369 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC11.24□□□□□ -0.613e-6■□□□□ 9.4
LSM11P83369 GMPR2-218ENST00000559287 1748 ntTSL 1 (best)11.22□□□□□ -0.613e-6■□□□□ 9.4
LSM11P83369 JMJD7-PLA2G4B-204ENST00000487292 3178 ntTSL 210.9□□□□□ -0.663e-6■□□□□ 9.4
LSM11P83369 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)10.78□□□□□ -0.683e-6■□□□□ 9.4
LSM11P83369 ACSF2-214ENST00000508245 665 ntTSL 510.68□□□□□ -0.73e-6■□□□□ 9.4
LSM11P83369 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC10.55□□□□□ -0.723e-6■□□□□ 9.4
Retrieved 100 of 11,495 protein–RNA pairs in 287.8 ms