Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.57■□□□□ 0.88
PEX3P56589 AL441883.1-201ENST00000566170 1045 ntBASIC20.57■□□□□ 0.88
PEX3P56589 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PEX3P56589 AC024243.1-201ENST00000609234 778 ntBASIC20.57■□□□□ 0.88
PEX3P56589 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PEX3P56589 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PEX3P56589 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX3P56589 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX3P56589 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX3P56589 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PEX3P56589 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
PEX3P56589 KRT18P23-201ENST00000435622 1283 ntBASIC20.56■□□□□ 0.88
PEX3P56589 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.56■□□□□ 0.88
PEX3P56589 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.56■□□□□ 0.88
PEX3P56589 DUX4L26-201ENST00000489078 1255 ntBASIC20.56■□□□□ 0.88
PEX3P56589 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PEX3P56589 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PEX3P56589 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 AL031432.5-201ENST00000641059 760 ntBASIC20.56■□□□□ 0.88
PEX3P56589 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.56■□□□□ 0.88
PEX3P56589 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.56■□□□□ 0.88
PEX3P56589 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.56■□□□□ 0.88
PEX3P56589 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.56■□□□□ 0.88
PEX3P56589 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PEX3P56589 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PEX3P56589 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PEX3P56589 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX3P56589 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PEX3P56589 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 TNXA-203ENST00000507684 2038 ntBASIC20.55■□□□□ 0.88
PEX3P56589 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.55■□□□□ 0.88
PEX3P56589 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.55■□□□□ 0.88
PEX3P56589 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PEX3P56589 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PEX3P56589 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.55■□□□□ 0.88
PEX3P56589 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.55■□□□□ 0.88
PEX3P56589 GCSHP2-201ENST00000560971 527 ntBASIC20.55■□□□□ 0.88
PEX3P56589 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 AC112497.1-201ENST00000624824 639 ntBASIC20.55■□□□□ 0.88
PEX3P56589 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.55■□□□□ 0.88
PEX3P56589 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.55■□□□□ 0.88
PEX3P56589 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PEX3P56589 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.55■□□□□ 0.88
PEX3P56589 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PEX3P56589 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX3P56589 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.55■□□□□ 0.88
PEX3P56589 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PEX3P56589 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.54■□□□□ 0.88
PEX3P56589 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
PEX3P56589 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 RNF152P1-201ENST00000397754 604 ntBASIC20.54■□□□□ 0.88
PEX3P56589 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.54■□□□□ 0.88
PEX3P56589 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.54■□□□□ 0.88
PEX3P56589 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.54■□□□□ 0.88
PEX3P56589 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.54■□□□□ 0.88
PEX3P56589 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PEX3P56589 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PEX3P56589 AC093525.10-201ENST00000625130 1569 ntBASIC20.54■□□□□ 0.88
PEX3P56589 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PEX3P56589 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX3P56589 AL499627.1-201ENST00000569373 2188 ntBASIC20.53■□□□□ 0.88
PEX3P56589 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PEX3P56589 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms