Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH12P55289 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH12P55289 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH12P55289 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH12P55289 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH12P55289 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 AC239809.2-201ENST00000415381 517 ntBASIC17.43■□□□□ 0.38
CDH12P55289 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CDH12P55289 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH12P55289 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH12P55289 TSPY23P-201ENST00000440136 739 ntBASIC17.43■□□□□ 0.38
CDH12P55289 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH12P55289 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH12P55289 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH12P55289 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH12P55289 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDH12P55289 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH12P55289 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CDH12P55289 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
CDH12P55289 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
CDH12P55289 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.42■□□□□ 0.38
CDH12P55289 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
CDH12P55289 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH12P55289 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CDH12P55289 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDH12P55289 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.42■□□□□ 0.38
CDH12P55289 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDH12P55289 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDH12P55289 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH12P55289 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH12P55289 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH12P55289 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 FZD10-202ENST00000539839 3282 ntBASIC17.41■□□□□ 0.38
CDH12P55289 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 KRT16P5-201ENST00000455284 522 ntBASIC17.41■□□□□ 0.38
CDH12P55289 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH12P55289 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDH12P55289 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDH12P55289 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH12P55289 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms