Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 STARP1-201ENST00000397973 869 ntBASIC19.1■□□□□ 0.65
CDH4P55283 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.1■□□□□ 0.65
CDH4P55283 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH4P55283 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH4P55283 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CDH4P55283 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDH4P55283 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH4P55283 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH4P55283 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH4P55283 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH4P55283 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CDH4P55283 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDH4P55283 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH4P55283 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH4P55283 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH4P55283 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH4P55283 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 AC034232.1-201ENST00000506026 1064 ntBASIC19.09■□□□□ 0.65
CDH4P55283 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH4P55283 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH4P55283 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH4P55283 NTF6B-201ENST00000591913 560 ntBASIC19.09■□□□□ 0.65
CDH4P55283 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH4P55283 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH4P55283 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH4P55283 BX323043.1-201ENST00000641006 1765 ntBASIC19.09■□□□□ 0.65
CDH4P55283 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDH4P55283 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CDH4P55283 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH4P55283 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH4P55283 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH4P55283 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH4P55283 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH4P55283 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH4P55283 AC093525.10-201ENST00000625130 1569 ntBASIC19.08■□□□□ 0.65
CDH4P55283 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CDH4P55283 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH4P55283 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH4P55283 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH4P55283 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH4P55283 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH4P55283 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH4P55283 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH4P55283 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.08■□□□□ 0.64
CDH4P55283 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDH4P55283 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.08■□□□□ 0.64
CDH4P55283 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.08■□□□□ 0.64
CDH4P55283 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH4P55283 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDH4P55283 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH4P55283 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH4P55283 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH4P55283 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH4P55283 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH4P55283 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 AP000593.1-201ENST00000393668 712 ntBASIC19.07■□□□□ 0.64
CDH4P55283 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.07■□□□□ 0.64
CDH4P55283 AL359075.1-203ENST00000462729 1002 ntBASIC19.07■□□□□ 0.64
CDH4P55283 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH4P55283 MIR3917-201ENST00000580971 93 ntBASIC19.07■□□□□ 0.64
CDH4P55283 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH4P55283 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDH4P55283 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH4P55283 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms