Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 KRT8P45-201ENST00000414328 1447 ntBASIC18.48■□□□□ 0.55
CDKN2DP55273 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKN2DP55273 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKN2DP55273 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CDKN2DP55273 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKN2DP55273 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CDKN2DP55273 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDKN2DP55273 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKN2DP55273 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 AL023284.2-201ENST00000405850 579 ntBASIC18.47■□□□□ 0.55
CDKN2DP55273 CRYGFP-201ENST00000418459 633 ntBASIC18.47■□□□□ 0.55
CDKN2DP55273 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 AC008550.1-201ENST00000511500 884 ntBASIC18.47■□□□□ 0.55
CDKN2DP55273 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CDKN2DP55273 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDKN2DP55273 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2DP55273 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2DP55273 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDKN2DP55273 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKN2DP55273 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKN2DP55273 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDKN2DP55273 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CDKN2DP55273 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKN2DP55273 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDKN2DP55273 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKN2DP55273 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 AP003071.4-201ENST00000562276 1284 ntBASIC18.46■□□□□ 0.55
CDKN2DP55273 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.46■□□□□ 0.55
CDKN2DP55273 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKN2DP55273 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDKN2DP55273 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 AC112777.1-201ENST00000540175 1423 ntBASIC18.46■□□□□ 0.55
CDKN2DP55273 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2DP55273 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDKN2DP55273 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKN2DP55273 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CDKN2DP55273 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CDKN2DP55273 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKN2DP55273 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CDKN2DP55273 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKN2DP55273 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDKN2DP55273 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDKN2DP55273 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDKN2DP55273 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 TSPY7P-201ENST00000431358 1114 ntBASIC18.45■□□□□ 0.54
CDKN2DP55273 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.45■□□□□ 0.54
CDKN2DP55273 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKN2DP55273 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.45■□□□□ 0.54
CDKN2DP55273 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKN2DP55273 TMEM191A-211ENST00000637163 1067 ntBASIC18.45■□□□□ 0.54
CDKN2DP55273 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDKN2DP55273 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 AC020763.4-201ENST00000623414 4170 ntBASIC18.45■□□□□ 0.54
CDKN2DP55273 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKN2DP55273 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms