Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NUBP1P53384 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC18.58■□□□□ 0.56
NUBP1P53384 AL645939.2-201ENST00000427340 991 ntBASIC18.58■□□□□ 0.56
NUBP1P53384 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NUBP1P53384 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUBP1P53384 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.58■□□□□ 0.56
NUBP1P53384 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NUBP1P53384 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.58■□□□□ 0.56
NUBP1P53384 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.58■□□□□ 0.56
NUBP1P53384 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUBP1P53384 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUBP1P53384 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUBP1P53384 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.58■□□□□ 0.56
NUBP1P53384 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NUBP1P53384 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NUBP1P53384 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.57■□□□□ 0.56
NUBP1P53384 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NUBP1P53384 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NUBP1P53384 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NUBP1P53384 AL035633.1-201ENST00000406139 838 ntBASIC18.57■□□□□ 0.56
NUBP1P53384 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC18.57■□□□□ 0.56
NUBP1P53384 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.57■□□□□ 0.56
NUBP1P53384 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NUBP1P53384 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
NUBP1P53384 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 AC011467.4-201ENST00000594891 528 ntBASIC18.57■□□□□ 0.56
NUBP1P53384 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.57■□□□□ 0.56
NUBP1P53384 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.57■□□□□ 0.56
NUBP1P53384 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUBP1P53384 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
NUBP1P53384 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NUBP1P53384 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NUBP1P53384 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.56■□□□□ 0.56
NUBP1P53384 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 COX20P2-201ENST00000452636 358 ntBASIC18.56■□□□□ 0.56
NUBP1P53384 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.56■□□□□ 0.56
NUBP1P53384 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.56■□□□□ 0.56
NUBP1P53384 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.56■□□□□ 0.56
NUBP1P53384 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 AC008147.4-201ENST00000617570 1204 ntBASIC18.56■□□□□ 0.56
NUBP1P53384 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.56■□□□□ 0.56
NUBP1P53384 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.56■□□□□ 0.56
NUBP1P53384 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
NUBP1P53384 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NUBP1P53384 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NUBP1P53384 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.56■□□□□ 0.56
NUBP1P53384 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUBP1P53384 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.56■□□□□ 0.56
NUBP1P53384 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.55■□□□□ 0.56
NUBP1P53384 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
NUBP1P53384 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 SMG8-203ENST00000578922 2178 ntBASIC18.55■□□□□ 0.56
NUBP1P53384 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
NUBP1P53384 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NUBP1P53384 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.55■□□□□ 0.56
NUBP1P53384 AC254562.1-201ENST00000417586 456 ntBASIC18.55■□□□□ 0.56
NUBP1P53384 AC092910.1-201ENST00000482027 1129 ntBASIC18.55■□□□□ 0.56
NUBP1P53384 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 OR7E14P-202ENST00000530490 1290 ntBASIC18.55■□□□□ 0.56
NUBP1P53384 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC18.55■□□□□ 0.56
NUBP1P53384 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.55■□□□□ 0.56
NUBP1P53384 AC021087.4-201ENST00000563761 564 ntBASIC18.55■□□□□ 0.56
NUBP1P53384 SNHG9-202ENST00000564014 471 ntBASIC18.55■□□□□ 0.56
NUBP1P53384 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.55■□□□□ 0.56
NUBP1P53384 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms