Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SOX6P35712 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.77■□□□□ 0.27
SOX6P35712 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SOX6P35712 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SOX6P35712 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SOX6P35712 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.76■□□□□ 0.27
SOX6P35712 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SOX6P35712 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.76■□□□□ 0.27
SOX6P35712 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.76■□□□□ 0.27
SOX6P35712 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.76■□□□□ 0.27
SOX6P35712 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.76■□□□□ 0.27
SOX6P35712 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SOX6P35712 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SOX6P35712 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.76■□□□□ 0.27
SOX6P35712 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX6P35712 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SOX6P35712 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
SOX6P35712 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.75■□□□□ 0.27
SOX6P35712 KRT18P5-201ENST00000436075 1291 ntBASIC16.75■□□□□ 0.27
SOX6P35712 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.75■□□□□ 0.27
SOX6P35712 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SOX6P35712 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.75■□□□□ 0.27
SOX6P35712 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.75■□□□□ 0.27
SOX6P35712 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX6P35712 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 AC104417.2-201ENST00000562989 1793 ntBASIC16.74■□□□□ 0.27
SOX6P35712 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX6P35712 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX6P35712 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX6P35712 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SOX6P35712 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SOX6P35712 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SOX6P35712 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SOX6P35712 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX6P35712 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX6P35712 MFSD11-216ENST00000590393 1141 ntBASIC16.74■□□□□ 0.27
SOX6P35712 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
SOX6P35712 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SOX6P35712 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX6P35712 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms