Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RFC1P35251 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 AL390955.1-201ENST00000428694 934 ntBASIC19.7■□□□□ 0.74
RFC1P35251 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.7■□□□□ 0.74
RFC1P35251 AC066615.1-201ENST00000640911 628 ntBASIC19.7■□□□□ 0.74
RFC1P35251 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RFC1P35251 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC1P35251 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC1P35251 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RFC1P35251 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RFC1P35251 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 AL357033.4-201ENST00000617703 1807 ntBASIC19.69■□□□□ 0.74
RFC1P35251 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC1P35251 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC1P35251 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 AL499627.1-201ENST00000569373 2188 ntBASIC19.69■□□□□ 0.74
RFC1P35251 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 AC009113.1-201ENST00000570267 2443 ntBASIC19.69■□□□□ 0.74
RFC1P35251 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.69■□□□□ 0.74
RFC1P35251 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RFC1P35251 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 CA15P1-201ENST00000481698 905 ntBASIC19.69■□□□□ 0.74
RFC1P35251 FITM1-202ENST00000559294 800 ntBASIC19.69■□□□□ 0.74
RFC1P35251 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
RFC1P35251 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC1P35251 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC1P35251 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC1P35251 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC1P35251 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC1P35251 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.68■□□□□ 0.74
RFC1P35251 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC1P35251 AC005082.1-201ENST00000413042 2259 ntBASIC19.68■□□□□ 0.74
RFC1P35251 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RFC1P35251 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.74
RFC1P35251 AC093827.2-201ENST00000512654 315 ntBASIC19.68■□□□□ 0.74
RFC1P35251 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC1P35251 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFC1P35251 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFC1P35251 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC1P35251 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 GPAT2P1-201ENST00000444924 1672 ntBASIC19.68■□□□□ 0.74
RFC1P35251 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.68■□□□□ 0.74
RFC1P35251 AC008556.1-201ENST00000610908 2040 ntBASIC19.68■□□□□ 0.74
RFC1P35251 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC1P35251 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC1P35251 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RFC1P35251 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.67■□□□□ 0.74
RFC1P35251 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.67■□□□□ 0.74
RFC1P35251 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 MIR1238-201ENST00000408483 83 ntBASIC19.67■□□□□ 0.74
RFC1P35251 AL596275.1-201ENST00000423464 877 ntBASIC19.67■□□□□ 0.74
RFC1P35251 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.67■□□□□ 0.74
RFC1P35251 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms