Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LCN1P31025 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LCN1P31025 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCN1P31025 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
LCN1P31025 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
LCN1P31025 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.3■□□□□ 0.36
LCN1P31025 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.29■□□□□ 0.36
LCN1P31025 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.29■□□□□ 0.36
LCN1P31025 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LCN1P31025 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LCN1P31025 TSPY14P-201ENST00000303979 915 ntBASIC17.29■□□□□ 0.36
LCN1P31025 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.29■□□□□ 0.36
LCN1P31025 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LCN1P31025 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 MIR1238-201ENST00000408483 83 ntBASIC17.29■□□□□ 0.36
LCN1P31025 EGLN1P1-201ENST00000531623 762 ntBASIC17.29■□□□□ 0.36
LCN1P31025 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.29■□□□□ 0.36
LCN1P31025 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.29■□□□□ 0.36
LCN1P31025 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 AC010653.2-201ENST00000623505 997 ntBASIC17.29■□□□□ 0.36
LCN1P31025 MYC-208ENST00000641036 567 ntBASIC17.29■□□□□ 0.36
LCN1P31025 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LCN1P31025 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.29■□□□□ 0.36
LCN1P31025 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.29■□□□□ 0.36
LCN1P31025 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCN1P31025 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LCN1P31025 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.28■□□□□ 0.36
LCN1P31025 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LCN1P31025 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
LCN1P31025 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
LCN1P31025 RCC2P3-201ENST00000418112 1537 ntBASIC17.28■□□□□ 0.36
LCN1P31025 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.28■□□□□ 0.36
LCN1P31025 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
LCN1P31025 MMP23A-201ENST00000234610 1017 ntBASIC17.28■□□□□ 0.36
LCN1P31025 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 MCCD1P1-208ENST00000445732 328 ntBASIC17.28■□□□□ 0.36
LCN1P31025 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.28■□□□□ 0.36
LCN1P31025 BX088651.1-201ENST00000540551 451 ntBASIC17.28■□□□□ 0.36
LCN1P31025 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
LCN1P31025 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.28■□□□□ 0.36
LCN1P31025 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LCN1P31025 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.28■□□□□ 0.36
LCN1P31025 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCN1P31025 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
LCN1P31025 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.28■□□□□ 0.36
LCN1P31025 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.27■□□□□ 0.36
LCN1P31025 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.27■□□□□ 0.36
LCN1P31025 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCN1P31025 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
LCN1P31025 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.27■□□□□ 0.36
LCN1P31025 AL138781.2-201ENST00000617896 1843 ntBASIC17.27■□□□□ 0.36
LCN1P31025 AL596275.1-201ENST00000423464 877 ntBASIC17.27■□□□□ 0.36
LCN1P31025 AC128688.1-201ENST00000487626 519 ntBASIC17.27■□□□□ 0.36
LCN1P31025 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LCN1P31025 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.27■□□□□ 0.36
LCN1P31025 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.27■□□□□ 0.36
LCN1P31025 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LCN1P31025 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms