Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.11■□□□□ 0.17
CD40P25942 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.11■□□□□ 0.17
CD40P25942 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.11■□□□□ 0.17
CD40P25942 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.11■□□□□ 0.17
CD40P25942 MIR3917-201ENST00000580971 93 ntBASIC16.11■□□□□ 0.17
CD40P25942 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CD40P25942 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.11■□□□□ 0.17
CD40P25942 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CD40P25942 AC116562.4-201ENST00000641316 2276 ntBASIC16.11■□□□□ 0.17
CD40P25942 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.11■□□□□ 0.17
CD40P25942 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CD40P25942 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 HCG11-201ENST00000411553 5696 ntBASIC16.1■□□□□ 0.17
CD40P25942 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CD40P25942 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.1■□□□□ 0.17
CD40P25942 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 AC092597.1-201ENST00000487352 616 ntBASIC16.1■□□□□ 0.17
CD40P25942 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.1■□□□□ 0.17
CD40P25942 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.1■□□□□ 0.17
CD40P25942 AC104390.1-201ENST00000555663 520 ntBASIC16.1■□□□□ 0.17
CD40P25942 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.1■□□□□ 0.17
CD40P25942 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 AL157888.1-201ENST00000631930 593 ntBASIC16.1■□□□□ 0.17
CD40P25942 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.1■□□□□ 0.17
CD40P25942 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.1■□□□□ 0.17
CD40P25942 HEIH-201ENST00000623091 1652 ntBASIC16.1■□□□□ 0.17
CD40P25942 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.1■□□□□ 0.17
CD40P25942 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD40P25942 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.09■□□□□ 0.17
CD40P25942 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.09■□□□□ 0.17
CD40P25942 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 AC006333.2-201ENST00000607957 2099 ntBASIC16.09■□□□□ 0.17
CD40P25942 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CD40P25942 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CD40P25942 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.09■□□□□ 0.17
CD40P25942 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.09■□□□□ 0.17
CD40P25942 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.09■□□□□ 0.17
CD40P25942 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.09■□□□□ 0.17
CD40P25942 AC116407.4-201ENST00000623319 1061 ntBASIC16.09■□□□□ 0.17
CD40P25942 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CD40P25942 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.09■□□□□ 0.17
CD40P25942 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.09■□□□□ 0.17
CD40P25942 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD40P25942 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CD40P25942 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD40P25942 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.08■□□□□ 0.17
CD40P25942 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD40P25942 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD40P25942 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD40P25942 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD40P25942 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms