Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NELFEP18615 AC106820.2-201ENST00000563775 3264 ntBASIC18.44■□□□□ 0.54
NELFEP18615 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NELFEP18615 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NELFEP18615 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 INGX-201ENST00000359239 846 ntBASIC18.44■□□□□ 0.54
NELFEP18615 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NELFEP18615 CCR12P-201ENST00000446203 998 ntBASIC18.44■□□□□ 0.54
NELFEP18615 FAM87A-204ENST00000613235 858 ntBASIC18.44■□□□□ 0.54
NELFEP18615 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.44■□□□□ 0.54
NELFEP18615 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
NELFEP18615 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.43■□□□□ 0.54
NELFEP18615 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
NELFEP18615 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NELFEP18615 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 LIN28AP1-201ENST00000429574 405 ntBASIC18.43■□□□□ 0.54
NELFEP18615 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 AC010203.1-204ENST00000548782 407 ntBASIC18.43■□□□□ 0.54
NELFEP18615 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 AL049597.2-201ENST00000565575 961 ntBASIC18.43■□□□□ 0.54
NELFEP18615 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.43■□□□□ 0.54
NELFEP18615 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.43■□□□□ 0.54
NELFEP18615 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.43■□□□□ 0.54
NELFEP18615 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NELFEP18615 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NELFEP18615 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.43■□□□□ 0.54
NELFEP18615 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NELFEP18615 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.42■□□□□ 0.54
NELFEP18615 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.42■□□□□ 0.54
NELFEP18615 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 CROCCP3-202ENST00000420820 1947 ntBASIC18.42■□□□□ 0.54
NELFEP18615 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NELFEP18615 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NELFEP18615 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.42■□□□□ 0.54
NELFEP18615 AL390961.4-201ENST00000623958 2535 ntBASIC18.42■□□□□ 0.54
NELFEP18615 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.41■□□□□ 0.54
NELFEP18615 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NELFEP18615 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NELFEP18615 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms