Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.3■□□□□ 0.84
SYN1P17600 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.3■□□□□ 0.84
SYN1P17600 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SYN1P17600 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.3■□□□□ 0.84
SYN1P17600 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SYN1P17600 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYN1P17600 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.3■□□□□ 0.84
SYN1P17600 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SYN1P17600 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYN1P17600 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
SYN1P17600 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.29■□□□□ 0.84
SYN1P17600 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.29■□□□□ 0.84
SYN1P17600 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.29■□□□□ 0.84
SYN1P17600 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.29■□□□□ 0.84
SYN1P17600 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
SYN1P17600 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.29■□□□□ 0.84
SYN1P17600 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
SYN1P17600 Z83851.2-201ENST00000609564 659 ntBASIC20.29■□□□□ 0.84
SYN1P17600 AP001269.4-201ENST00000609611 512 ntBASIC20.29■□□□□ 0.84
SYN1P17600 AL596442.2-201ENST00000610240 980 ntBASIC20.29■□□□□ 0.84
SYN1P17600 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.29■□□□□ 0.84
SYN1P17600 AL391422.3-201ENST00000603791 2761 ntBASIC20.29■□□□□ 0.84
SYN1P17600 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SYN1P17600 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
SYN1P17600 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYN1P17600 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SYN1P17600 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYN1P17600 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.28■□□□□ 0.84
SYN1P17600 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYN1P17600 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYN1P17600 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYN1P17600 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYN1P17600 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYN1P17600 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYN1P17600 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.28■□□□□ 0.84
SYN1P17600 RNA5SP415-201ENST00000517246 115 ntBASIC20.28■□□□□ 0.84
SYN1P17600 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.28■□□□□ 0.84
SYN1P17600 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.28■□□□□ 0.84
SYN1P17600 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.28■□□□□ 0.84
SYN1P17600 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYN1P17600 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYN1P17600 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYN1P17600 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SYN1P17600 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.27■□□□□ 0.84
SYN1P17600 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.27■□□□□ 0.84
SYN1P17600 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.27■□□□□ 0.84
SYN1P17600 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SYN1P17600 HTR5BP-201ENST00000430851 1154 ntBASIC20.27■□□□□ 0.84
SYN1P17600 AC244107.1-201ENST00000442033 332 ntBASIC20.27■□□□□ 0.84
SYN1P17600 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SYN1P17600 AC012640.2-201ENST00000561606 901 ntBASIC20.27■□□□□ 0.84
SYN1P17600 AC021087.4-201ENST00000563761 564 ntBASIC20.27■□□□□ 0.84
SYN1P17600 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SYN1P17600 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SYN1P17600 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SYN1P17600 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYN1P17600 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.27■□□□□ 0.83
SYN1P17600 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SYN1P17600 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SYN1P17600 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYN1P17600 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYN1P17600 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYN1P17600 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
SYN1P17600 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYN1P17600 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SYN1P17600 RBM17P3-201ENST00000417687 1192 ntBASIC20.26■□□□□ 0.83
SYN1P17600 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.26■□□□□ 0.83
SYN1P17600 CYMP-203ENST00000474680 1263 ntBASIC20.26■□□□□ 0.83
SYN1P17600 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.26■□□□□ 0.83
SYN1P17600 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYN1P17600 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.26■□□□□ 0.83
SYN1P17600 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.26■□□□□ 0.83
SYN1P17600 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.26■□□□□ 0.83
SYN1P17600 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.26■□□□□ 0.83
SYN1P17600 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms