Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.1■□□□□ 0.97
HOXC6P09630 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 AKR1C7P-201ENST00000305623 895 ntBASIC21.1■□□□□ 0.97
HOXC6P09630 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.1■□□□□ 0.97
HOXC6P09630 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.1■□□□□ 0.97
HOXC6P09630 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.1■□□□□ 0.97
HOXC6P09630 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HOXC6P09630 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.09■□□□□ 0.97
HOXC6P09630 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HOXC6P09630 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.09■□□□□ 0.97
HOXC6P09630 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HOXC6P09630 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
HOXC6P09630 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.09■□□□□ 0.97
HOXC6P09630 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXC6P09630 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.09■□□□□ 0.97
HOXC6P09630 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.09■□□□□ 0.97
HOXC6P09630 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 AC006333.2-201ENST00000607957 2099 ntBASIC21.09■□□□□ 0.97
HOXC6P09630 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.09■□□□□ 0.97
HOXC6P09630 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HOXC6P09630 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HOXC6P09630 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HOXC6P09630 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.09■□□□□ 0.97
HOXC6P09630 AFG3L1P-217ENST00000557444 2447 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 KRT89P-201ENST00000620027 1478 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 TREX1-205ENST00000625293 1783 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC6P09630 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC6P09630 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.08■□□□□ 0.97
HOXC6P09630 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC6P09630 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC6P09630 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
HOXC6P09630 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.08■□□□□ 0.97
HOXC6P09630 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HOXC6P09630 FEM1AP3-201ENST00000403722 1741 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC6P09630 GUSBP12-201ENST00000513727 720 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.08■□□□□ 0.97
HOXC6P09630 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
HOXC6P09630 AC024563.2-201ENST00000603282 481 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC6P09630 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.08■□□□□ 0.97
HOXC6P09630 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC6P09630 BX640515.1-201ENST00000617215 977 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 REXO1L6P-202ENST00000619970 1078 ntBASIC21.08■□□□□ 0.97
HOXC6P09630 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.08■□□□□ 0.97
HOXC6P09630 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.08■□□□□ 0.97
HOXC6P09630 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.08■□□□□ 0.97
HOXC6P09630 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC6P09630 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC6P09630 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC6P09630 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC6P09630 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC6P09630 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXC6P09630 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HOXC6P09630 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXC6P09630 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
HOXC6P09630 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.07■□□□□ 0.96
HOXC6P09630 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.07■□□□□ 0.96
HOXC6P09630 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.07■□□□□ 0.96
HOXC6P09630 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
HOXC6P09630 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC6P09630 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms