Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOA4P06727 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.76■□□□□ 0.59
APOA4P06727 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOA4P06727 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOA4P06727 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
APOA4P06727 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 AC116562.2-201ENST00000507042 360 ntBASIC18.75■□□□□ 0.59
APOA4P06727 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.75■□□□□ 0.59
APOA4P06727 MIR4785-201ENST00000585005 73 ntBASIC18.75■□□□□ 0.59
APOA4P06727 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.75■□□□□ 0.59
APOA4P06727 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOA4P06727 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.74■□□□□ 0.59
APOA4P06727 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 AC073592.3-201ENST00000625118 1834 ntBASIC18.74■□□□□ 0.59
APOA4P06727 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
APOA4P06727 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.74■□□□□ 0.59
APOA4P06727 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.74■□□□□ 0.59
APOA4P06727 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.74■□□□□ 0.59
APOA4P06727 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.74■□□□□ 0.59
APOA4P06727 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
APOA4P06727 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.74■□□□□ 0.59
APOA4P06727 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 KRT8P11-201ENST00000409686 1436 ntBASIC18.74■□□□□ 0.59
APOA4P06727 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOA4P06727 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.73■□□□□ 0.59
APOA4P06727 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
APOA4P06727 TSPY7P-201ENST00000431358 1114 ntBASIC18.73■□□□□ 0.59
APOA4P06727 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.73■□□□□ 0.59
APOA4P06727 AP003071.4-201ENST00000562276 1284 ntBASIC18.73■□□□□ 0.59
APOA4P06727 DGCR10-201ENST00000609839 495 ntBASIC18.73■□□□□ 0.59
APOA4P06727 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.73■□□□□ 0.59
APOA4P06727 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.73■□□□□ 0.59
APOA4P06727 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
APOA4P06727 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOA4P06727 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms