Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TUBB4AP04350 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBB4AP04350 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBB4AP04350 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBB4AP04350 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBB4AP04350 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBB4AP04350 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TUBB4AP04350 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TUBB4AP04350 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB4AP04350 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.01■□□□□ 0.79
TUBB4AP04350 AC008694.1-202ENST00000636953 945 ntBASIC20.01■□□□□ 0.79
TUBB4AP04350 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TUBB4AP04350 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 AC124283.5-201ENST00000624661 1809 ntBASIC20.01■□□□□ 0.79
TUBB4AP04350 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TUBB4AP04350 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB4AP04350 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.01■□□□□ 0.79
TUBB4AP04350 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.01■□□□□ 0.79
TUBB4AP04350 AL121761.2-201ENST00000598007 1648 ntBASIC20.01■□□□□ 0.79
TUBB4AP04350 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 AC080080.1-201ENST00000625121 2420 ntBASIC20.01■□□□□ 0.79
TUBB4AP04350 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TUBB4AP04350 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TUBB4AP04350 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TUBB4AP04350 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 TNRC18P3-201ENST00000441896 2691 ntBASIC20■□□□□ 0.79
TUBB4AP04350 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TUBB4AP04350 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20■□□□□ 0.79
TUBB4AP04350 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20■□□□□ 0.79
TUBB4AP04350 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20■□□□□ 0.79
TUBB4AP04350 BID-214ENST00000617586 542 ntTSL 5 BASIC20■□□□□ 0.79
TUBB4AP04350 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
TUBB4AP04350 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
TUBB4AP04350 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 HLA-DQB1-201ENST00000374943 1656 ntBASIC20■□□□□ 0.79
TUBB4AP04350 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20■□□□□ 0.79
TUBB4AP04350 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20■□□□□ 0.79
TUBB4AP04350 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TUBB4AP04350 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBB4AP04350 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.99■□□□□ 0.79
TUBB4AP04350 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBB4AP04350 AL023806.1-201ENST00000603994 1649 ntBASIC19.99■□□□□ 0.79
TUBB4AP04350 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TUBB4AP04350 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.99■□□□□ 0.79
TUBB4AP04350 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.99■□□□□ 0.79
TUBB4AP04350 TUBB8P6-201ENST00000436895 1288 ntBASIC19.99■□□□□ 0.79
TUBB4AP04350 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.99■□□□□ 0.79
TUBB4AP04350 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.99■□□□□ 0.79
TUBB4AP04350 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBB4AP04350 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBB4AP04350 AC010980.2-201ENST00000587099 1412 ntBASIC19.99■□□□□ 0.79
TUBB4AP04350 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBB4AP04350 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TUBB4AP04350 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms