Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CLDN1O95832 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.67■□□□□ 0.26
CLDN1O95832 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN1O95832 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN1O95832 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 TOB2P1-201ENST00000469761 992 ntBASIC16.67■□□□□ 0.26
CLDN1O95832 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 AC092865.5-201ENST00000545435 363 ntBASIC16.67■□□□□ 0.26
CLDN1O95832 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN1O95832 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN1O95832 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN1O95832 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN1O95832 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN1O95832 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN1O95832 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN1O95832 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLDN1O95832 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN1O95832 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN1O95832 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN1O95832 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN1O95832 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 MIR1233-2-201ENST00000408138 82 ntBASIC16.66■□□□□ 0.26
CLDN1O95832 MIR1233-1-201ENST00000408722 82 ntBASIC16.66■□□□□ 0.26
CLDN1O95832 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN1O95832 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN1O95832 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.66■□□□□ 0.26
CLDN1O95832 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.66■□□□□ 0.26
CLDN1O95832 AC024243.1-201ENST00000609234 778 ntBASIC16.66■□□□□ 0.26
CLDN1O95832 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN1O95832 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN1O95832 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN1O95832 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN1O95832 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN1O95832 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN1O95832 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN1O95832 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN1O95832 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN1O95832 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.65■□□□□ 0.26
CLDN1O95832 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN1O95832 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.65■□□□□ 0.26
CLDN1O95832 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN1O95832 AC138894.3-201ENST00000603787 634 ntBASIC16.65■□□□□ 0.26
CLDN1O95832 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN1O95832 AC079602.3-201ENST00000623931 403 ntBASIC16.65■□□□□ 0.26
CLDN1O95832 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN1O95832 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN1O95832 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN1O95832 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN1O95832 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN1O95832 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN1O95832 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN1O95832 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN1O95832 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLDN1O95832 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms