Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM3O75382 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM3O75382 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM3O75382 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM3O75382 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM3O75382 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM3O75382 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM3O75382 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM3O75382 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM3O75382 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM3O75382 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM3O75382 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRIM3O75382 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM3O75382 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM3O75382 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM3O75382 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.41■□□□□ 0.38
TRIM3O75382 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.41■□□□□ 0.38
TRIM3O75382 TSPY23P-201ENST00000440136 739 ntBASIC17.41■□□□□ 0.38
TRIM3O75382 FAM210CP-201ENST00000445714 574 ntBASIC17.41■□□□□ 0.38
TRIM3O75382 CA15P1-201ENST00000481698 905 ntBASIC17.41■□□□□ 0.38
TRIM3O75382 AC128688.1-201ENST00000487626 519 ntBASIC17.41■□□□□ 0.38
TRIM3O75382 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM3O75382 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM3O75382 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM3O75382 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRIM3O75382 AL023803.3-201ENST00000615559 522 ntBASIC17.41■□□□□ 0.38
TRIM3O75382 AC005363.2-201ENST00000618631 242 ntBASIC17.41■□□□□ 0.38
TRIM3O75382 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRIM3O75382 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM3O75382 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM3O75382 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRIM3O75382 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM3O75382 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM3O75382 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
TRIM3O75382 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM3O75382 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 INGX-201ENST00000359239 846 ntBASIC17.4■□□□□ 0.38
TRIM3O75382 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.4■□□□□ 0.38
TRIM3O75382 CCR12P-201ENST00000446203 998 ntBASIC17.4■□□□□ 0.38
TRIM3O75382 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM3O75382 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM3O75382 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM3O75382 AC116562.4-202ENST00000641738 218 ntBASIC17.4■□□□□ 0.38
TRIM3O75382 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM3O75382 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM3O75382 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM3O75382 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.39■□□□□ 0.38
TRIM3O75382 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.39■□□□□ 0.38
TRIM3O75382 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TRIM3O75382 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM3O75382 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM3O75382 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TRIM3O75382 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM3O75382 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM3O75382 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
TRIM3O75382 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
TRIM3O75382 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM3O75382 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms